STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95732.1RecB family exonuclease. (286 aa)    
Predicted Functional Partners:
ACU95729.1
Uncharacterized conserved protein; PFAM: Bacterial membrane flanked domain.
 
     0.853
ACU95730.1
Predicted metal-dependent phosphoesterase, PHP family; PFAM: PHP domain.
       0.804
ACU95731.1
PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427.
       0.793
ACU95733.1
Hypothetical protein.
       0.765
ACU95728.1
Hypothetical protein.
       0.638
ACU95548.1
Hypothetical protein.
  
     0.541
thyX
Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
   
 0.507
ACU95727.1
ADP-ribose pyrophosphatase; PFAM: NUDIX domain; Belongs to the Nudix hydrolase family.
       0.470
ACU96132.1
Hypothetical protein.
  
     0.458
ACU98031.1
Hypothetical protein.
  
     0.456
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.