STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU95787.1PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain. (451 aa)    
Predicted Functional Partners:
ACU95784.1
D-mannonate dehydratase; PFAM: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; Mandelate racemase / muconate lactonizing enzyme, C-terminal domain.
 
  
 0.994
ACU95786.1
Altronate dehydratase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus.
 
 0.993
ACU95779.1
PFAM: Glucuronate isomerase.
 
 
 0.989
ACU95785.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
 
   
 0.889
ACU95781.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
  
  
 0.806
ACU95782.1
Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
    0.784
ACU95783.1
ABC-type spermidine/putrescine transport system, permease component II; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.778
ACU98777.1
Hypothetical protein.
     0.715
ACU97760.1
PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
  
 0.603
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NADP oxidoreductase coenzyme F420-dependent; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
      
 0.582
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.