STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU96171.1Sugar phosphate isomerase/epimerase; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel. (335 aa)    
Predicted Functional Partners:
ACU96163.1
Predicted dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
 
  
 0.913
ACU96172.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
 
     0.876
ACU96168.1
Predicted metal-dependent hydrolase with TIM-barrel fold protein; PFAM: TatD related DNase.
  
  
 0.843
ACU96165.1
PFAM: Myo-inositol-1-phosphate synthase.
       0.833
ACU96166.1
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase; PFAM: UbiA prenyltransferase family.
       0.833
ACU96167.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
       0.833
ACU96169.1
PFAM: Xylose isomerase-like TIM barrel.
       0.833
ACU96170.1
Uncharacterized AP superfamily protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
       0.833
ACU96162.1
PFAM: Periplasmic binding proteins and sugar binding domain of the LacI family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
    0.770
ACU96164.1
Glucose/sorbosone dehydrogenase; PFAM: Domain of Unknown Function (DUF1080); PKD domain; Carbohydrate binding module (family 6).
  
  
 0.667
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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