Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACU95166.1 | ACU96173.1 | Svir_00770 | Svir_11170 | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | Hypothetical protein. | 0.483 |
ACU95430.1 | ACU96173.1 | Svir_03500 | Svir_11170 | PFAM: GAF domain; EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | Hypothetical protein. | 0.651 |
ACU95430.1 | ACU96174.1 | Svir_03500 | Svir_11180 | PFAM: GAF domain; EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | 0.540 |
ACU95430.1 | ACU96672.1 | Svir_03500 | Svir_16390 | PFAM: GAF domain; EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: PAS fold; GGDEF domain; EAL domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; PAS domain S-box. | 0.966 |
ACU95430.1 | ACU97127.1 | Svir_03500 | Svir_21140 | PFAM: GAF domain; EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | Hypothetical protein. | 0.509 |
ACU95430.1 | ACU98654.1 | Svir_03500 | Svir_37050 | PFAM: GAF domain; EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | PFAM: PAS fold; PAS fold; GGDEF domain; PAS fold; EAL domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; PAS domain S-box. | 0.967 |
ACU95626.1 | ACU96173.1 | Svir_05520 | Svir_11170 | PFAM: Domain of unknown function (DUF1707). | Hypothetical protein. | 0.503 |
ACU96173.1 | ACU95166.1 | Svir_11170 | Svir_00770 | Hypothetical protein. | Glycosyltransferase; PFAM: Glycosyl transferases group 1. | 0.483 |
ACU96173.1 | ACU95430.1 | Svir_11170 | Svir_03500 | Hypothetical protein. | PFAM: GAF domain; EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.651 |
ACU96173.1 | ACU95626.1 | Svir_11170 | Svir_05520 | Hypothetical protein. | PFAM: Domain of unknown function (DUF1707). | 0.503 |
ACU96173.1 | ACU96174.1 | Svir_11170 | Svir_11180 | Hypothetical protein. | PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | 0.557 |
ACU96173.1 | ACU96341.1 | Svir_11170 | Svir_12940 | Hypothetical protein. | Uncharacterized conserved protein; PFAM: Iron-sulphur cluster biosynthesis; Belongs to the HesB/IscA family. | 0.475 |
ACU96173.1 | ACU96672.1 | Svir_11170 | Svir_16390 | Hypothetical protein. | PFAM: PAS fold; GGDEF domain; EAL domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; PAS domain S-box. | 0.601 |
ACU96173.1 | ACU97127.1 | Svir_11170 | Svir_21140 | Hypothetical protein. | Hypothetical protein. | 0.501 |
ACU96173.1 | ACU97233.1 | Svir_11170 | Svir_22250 | Hypothetical protein. | PFAM: Bacterial regulatory proteins, tetR family. | 0.452 |
ACU96173.1 | ACU97785.1 | Svir_11170 | Svir_28040 | Hypothetical protein. | Glutamate synthase (NADH) large subunit; PFAM: GXGXG motif; Glutamate synthase central domain; Conserved region in glutamate synthase; Glutamine amidotransferases class-II. | 0.636 |
ACU96173.1 | ACU98654.1 | Svir_11170 | Svir_37050 | Hypothetical protein. | PFAM: PAS fold; PAS fold; GGDEF domain; PAS fold; EAL domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; PAS domain S-box. | 0.657 |
ACU96174.1 | ACU95430.1 | Svir_11180 | Svir_03500 | PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | PFAM: GAF domain; EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. | 0.540 |
ACU96174.1 | ACU96173.1 | Svir_11180 | Svir_11170 | PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein. | 0.557 |
ACU96341.1 | ACU96173.1 | Svir_12940 | Svir_11170 | Uncharacterized conserved protein; PFAM: Iron-sulphur cluster biosynthesis; Belongs to the HesB/IscA family. | Hypothetical protein. | 0.475 |
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