STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU96348.1PFAM: Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit. (248 aa)    
Predicted Functional Partners:
ACU96349.1
PFAM: Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit.
 
 
0.993
ACU96350.1
3-carboxy-cis,cis-muconate cycloisomerase; PFAM: Adenylosuccinate lyase C-terminus; Lyase; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.991
ACU97653.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase.
 
 
 0.983
ACU96352.1
PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; 4-carboxymuconolactone decarboxylase.
 
  
 0.912
ACU98780.1
Protocatechuate 4,5-dioxygenase beta subunit; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
    
 0.906
ACU98781.1
PFAM: Aromatic-ring-opening dioxygenase LigAB, LigA subunit; TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit.
    
 0.906
ACU96345.1
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; PFAM: Coenzyme A transferase.
 
  
 0.745
ACU96351.1
PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase.
  
   
 0.719
ACU96346.1
Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; PFAM: Coenzyme A transferase.
 
  
 0.717
ACU96943.1
PFAM: Catechol dioxygenase N terminus; Dioxygenase; TIGRFAM: catechol 1,2-dioxygenase, Actinobacterial.
 
  
0.602
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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