STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU96425.1PFAM: Serpin (serine protease inhibitor); Belongs to the serpin family. (375 aa)    
Predicted Functional Partners:
ACU96426.1
Hypothetical protein.
       0.773
ACU96066.1
Secreted trypsin-like serine protease; PFAM: Trypsin.
 
 
 0.736
ACU96424.1
PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; deoxyguanosinetriphosphate triphosphohydrolase, putative; Belongs to the dGTPase family. Type 2 subfamily.
       0.733
ACU96107.1
Hypothetical protein.
   
 0.669
ACU98416.1
PFAM: ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
    
  0.637
ACU96423.1
PFAM: Bacterial regulatory proteins, tetR family.
       0.580
ACU96422.1
Esterase/lipase; PFAM: Carboxylesterase.
 
 
  0.565
ACU97130.1
PFAM: Multicopper oxidase; Multicopper oxidase.
   
  0.531
ACU97131.1
PFAM: Multicopper oxidase; Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
   
  0.531
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.462
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.