STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU96513.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
ACU95145.1
PFAM: Helix-turn-helix.
  
     0.763
ACU95508.1
Hypothetical protein.
  
     0.744
ACU96583.1
Hypothetical protein.
  
     0.742
ACU96031.1
Predicted metal-dependent membrane protease; PFAM: CAAX amino terminal protease family.
  
     0.738
ACU97530.1
Hypothetical protein.
  
     0.699
ACU95507.1
Hypothetical protein.
  
     0.694
ACU95513.1
Secretion protein snm4; PFAM: Protein of unknown function (DUF571); TIGRFAM: secretion protein snm4.
  
     0.693
ACU96540.1
Hypothetical protein.
  
     0.683
ACU97194.1
Hypothetical protein.
  
     0.680
ACU95573.1
Hypothetical protein.
  
     0.671
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.