STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU96661.1Uncharacterized conserved protein; PFAM: Prokaryotic protein of unknown function (DUF849). (295 aa)    
Predicted Functional Partners:
ACU96660.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain.
 
  
 0.964
ACU96659.1
Predicted thioesterase.
 
  
 0.962
ACU96662.1
PFAM: Bacterial regulatory proteins, tetR family.
 
     0.836
ACU96658.1
ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.797
ACU96657.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
    0.702
ACU96654.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
       0.660
ACU96655.1
ATPase component of various ABC-type transport systems with duplicated ATPase domain protein; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK; Belongs to the ABC transporter superfamily.
       0.660
ACU96656.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.660
ACU96883.1
Predicted metal-dependent hydrolase; PFAM: Putative cyclase.
  
    0.653
ACU95605.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
   
    0.440
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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