STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU96697.1ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component. (266 aa)    
Predicted Functional Partners:
ACU96698.1
Permease component of ABC-type sugar transporter; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: ATP synthase subunit 6 (eukaryotes), also subunit A (prokaryotes).
 
 0.987
ACU95721.1
Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.983
ACU96218.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.965
ACU96217.1
Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.947
ACU96699.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.942
ACU96732.1
Carbohydrate ABC transporter ATP-binding protein; PFAM: ABC transporter; TOBE domain.
 
 0.933
ACU95723.1
Carbohydrate ABC transporter ATP-binding protein; PFAM: ABC transporter; TOBE domain.
 
 0.932
ACU97348.1
Carbohydrate ABC transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.929
ACU95720.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.917
ACU95781.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
 
 0.900
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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