STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU96743.1TIGRFAM: CRISPR-associated helicase Cas3. (919 aa)    
Predicted Functional Partners:
ACU96747.1
PFAM: CRISPR-associated protein (Cas_Cas5e); TIGRFAM: CRISPR-associated protein Cas5, Ecoli subtype; CRISPR-associated protein Cas5, N-terminal domain.
 
 
 0.991
ACU96746.1
PFAM: CT1975-like protein; TIGRFAM: CRISPR-associated protein, Cse4 family.
 
 
 0.973
ACU96748.1
PFAM: CRISPR associated protein; TIGRFAM: CRISPR-associated protein, Cse3 family.
 
 
 
 0.969
ACU96434.1
PFAM: CT1975-like protein; TIGRFAM: CRISPR-associated protein, Cse4 family.
 
 
 0.955
ACU96435.1
PFAM: CRISPR-associated protein (Cas_Cas5e); TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5, E. coli subtype.
 
 
 0.955
ACU96761.1
PFAM: CT1975-like protein; TIGRFAM: CRISPR-associated protein, Cse4 family.
 
 
 0.955
ACU96744.1
PFAM: CRISPR-associated protein Cse1 (CRISPR_cse1); TIGRFAM: CRISPR-associated protein, Cse1 family.
 
 
 0.954
ACU96759.1
PFAM: CRISPR associated protein; TIGRFAM: CRISPR-associated protein, Cse3 family.
 
 
 
 0.954
ACU96436.1
PFAM: CRISPR associated protein; TIGRFAM: CRISPR-associated protein, Cse3 family.
 
 
 
 0.953
ACU96432.1
PFAM: CRISPR-associated protein Cse1 (CRISPR_cse1); TIGRFAM: CRISPR-associated protein, Cse1 family.
 
 
 0.936
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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