STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU97282.1Ferredoxin; PFAM: Protein of unknown function (DUF1271). (65 aa)    
Predicted Functional Partners:
ACU97284.1
PFAM: Cytochrome P450.
 
  
 0.880
ACU97283.1
NAD(P)H-nitrite reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.858
ACU97280.1
PFAM: Cytochrome P450.
 
  
 0.855
ACU97281.1
PFAM: Bacterial regulatory proteins, tetR family.
 
     0.789
ACU97285.1
Ferredoxin; PFAM: Protein of unknown function (DUF1271).
 
    
0.648
ACU98312.1
PFAM: Cytochrome P450.
 
  
 0.473
ACU95414.1
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain.
     
 0.419
ACU95389.1
Hypothetical protein.
  
    0.406
ACU97728.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.