STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU97357.1Hypothetical protein. (1465 aa)    
Predicted Functional Partners:
ACU97355.1
Hypothetical protein.
 
  
 0.879
ACU97356.1
Hypothetical protein.
       0.773
ACU97358.1
Hypothetical protein.
       0.773
ACU97359.1
Uncharacterized conserved protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
       0.693
ACU97632.1
TIGRFAM: lycopene cyclase domain.
  
     0.668
ACU98653.1
PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.622
ACU95573.1
Hypothetical protein.
 
  
 0.621
ACU97631.1
TIGRFAM: lycopene cyclase domain.
  
     0.564
ACU98835.1
Hypothetical protein.
 
   0.554
ACU98654.1
PFAM: PAS fold; PAS fold; GGDEF domain; PAS fold; EAL domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; PAS domain S-box.
  
  
 0.534
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.