STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU97465.1PFAM: Bacterial regulatory proteins, tetR family. (198 aa)    
Predicted Functional Partners:
ACU96100.1
PFAM: Bacterial regulatory proteins, tetR family.
  
    0.551
ACU97464.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase, middle domain.
       0.535
ACU98001.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.512
ACU97466.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
       0.468
ACU96681.1
TIGRFAM: conserved hypothetical protein TIGR03084; uncharacterized Actinobacterial protein TIGR03083.
 
     0.455
ACU98115.1
DNA-3-methyladenine glycosylase II; PFAM: AlkA N-terminal domain; Bacterial regulatory helix-turn-helix proteins, AraC family; Metal binding domain of Ada.
  
     0.451
ACU96682.1
PFAM: Protein of unknown function (DUF1446).
 
     0.449
ACU95740.1
PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.425
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.