STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU97692.1PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain. (268 aa)    
Predicted Functional Partners:
ACU98805.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
  
     0.775
ACU97146.1
PFAM: Bacterial transcriptional regulator; IclR helix-turn-helix domain.
  
     0.774
ACU95963.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
  
     0.770
ACU95192.1
Transcriptional regulator; PFAM: IclR helix-turn-helix domain.
  
     0.701
ACU97693.1
PFAM: Bacterial regulatory proteins, gntR family.
  
    0.553
ACU95691.1
PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370.
  
    0.448
ACU95692.1
Biotin-dependent carboxylase-like protein; PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain.
  
    0.423
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.