STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU97764.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
recX
Uncharacterized conserved protein; Modulates RecA activity; Belongs to the RecX family.
       0.578
recA
Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.578
ACU95188.1
PFAM: CAAX amino terminal protease family.
  
     0.576
ACU97765.1
Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.
       0.492
ACU96212.1
PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.
      
 0.450
rpsT
SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.
      
 0.450
nucS
Predicted nuclease of the RecB family; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
      
 0.450
ACU95752.1
DNA/RNA helicase, superfamily I; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
  
     0.447
ACU97766.1
ATP dependent helicase, Lhr family; PFAM: DEAD/DEAH box helicase; Helicase conserved C-terminal domain; DEAD/H associated.
       0.412
ACU98075.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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