STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU97820.1Acetyltransferase (isoleucine patch superfamily); PFAM: Bacterial transferase hexapeptide (three repeats). (244 aa)    
Predicted Functional Partners:
ACU97826.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
 
     0.839
ACU97809.1
Methyltransferase family protein; PFAM: Methyltransferase domain.
 
   
 0.826
ACU96306.1
Hypothetical protein.
 
   
 0.806
ACU97485.1
Hypothetical protein.
  
     0.771
ACU97810.1
Uncharacterized conserved protein; PFAM: Glycosyl hydrolase family 57; Domain of unknown function (DUF1957); Belongs to the glycosyl hydrolase 57 family.
  
   
 0.730
ACU97677.1
PFAM: Glycosyl transferase family 2; Polysaccharide deacetylase; Acyltransferase family.
 
   
 0.650
ACU97419.1
Hypothetical protein.
  
    0.624
ACU97812.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
  
 0.594
ACU97821.1
PFAM: Inosine-uridine preferring nucleoside hydrolase.
  
    0.566
ACU98120.1
Hypothetical protein.
  
     0.499
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.