STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU97839.1PFAM: Universal stress protein family. (149 aa)    
Predicted Functional Partners:
ACU97840.1
PFAM: Adenylate and Guanylate cyclase catalytic domain.
 
     0.889
ACU97838.1
Hypothetical protein.
       0.559
ACU95229.1
Predicted membrane protein; PFAM: GtrA-like protein.
  
     0.552
ACU95446.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
     0.499
ACU98642.1
PFAM: Bacterial membrane protein of unknown function (DUF893).
  
    0.499
ACU95220.1
Membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily.
 
     0.492
ACU95263.1
PFAM: HAMP domain; Adenylate and Guanylate cyclase catalytic domain.
  
     0.487
ACU95673.1
PFAM: Protein of unknown function (DUF2029).
  
    0.408
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.