Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACU95309.1 | ACU98318.1 | Svir_02270 | Svir_33540 | PFAM: Protein of unknown function (DUF742). | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | 0.670 |
ACU95309.1 | ACU98320.1 | Svir_02270 | Svir_33560 | PFAM: Protein of unknown function (DUF742). | Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain. | 0.762 |
ACU95309.1 | ACU98321.1 | Svir_02270 | Svir_33570 | PFAM: Protein of unknown function (DUF742). | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.787 |
ACU95767.1 | ACU98317.1 | Svir_06960 | Svir_33530 | PFAM: Protein of unknown function (DUF742). | Cytochrome P450. | 0.531 |
ACU95767.1 | ACU98318.1 | Svir_06960 | Svir_33540 | PFAM: Protein of unknown function (DUF742). | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | 0.531 |
ACU95767.1 | ACU98320.1 | Svir_06960 | Svir_33560 | PFAM: Protein of unknown function (DUF742). | Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain. | 0.751 |
ACU95767.1 | ACU98321.1 | Svir_06960 | Svir_33570 | PFAM: Protein of unknown function (DUF742). | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.810 |
ACU98317.1 | ACU95767.1 | Svir_33530 | Svir_06960 | Cytochrome P450. | PFAM: Protein of unknown function (DUF742). | 0.531 |
ACU98317.1 | ACU98318.1 | Svir_33530 | Svir_33540 | Cytochrome P450. | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | 0.805 |
ACU98317.1 | ACU98319.1 | Svir_33530 | Svir_33550 | Cytochrome P450. | PFAM: Protein of unknown function (DUF742). | 0.895 |
ACU98317.1 | ACU98320.1 | Svir_33530 | Svir_33560 | Cytochrome P450. | Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain. | 0.858 |
ACU98317.1 | ACU98321.1 | Svir_33530 | Svir_33570 | Cytochrome P450. | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.918 |
ACU98318.1 | ACU95309.1 | Svir_33540 | Svir_02270 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | PFAM: Protein of unknown function (DUF742). | 0.670 |
ACU98318.1 | ACU95767.1 | Svir_33540 | Svir_06960 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | PFAM: Protein of unknown function (DUF742). | 0.531 |
ACU98318.1 | ACU98317.1 | Svir_33540 | Svir_33530 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | Cytochrome P450. | 0.805 |
ACU98318.1 | ACU98319.1 | Svir_33540 | Svir_33550 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | PFAM: Protein of unknown function (DUF742). | 0.943 |
ACU98318.1 | ACU98320.1 | Svir_33540 | Svir_33560 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | Uncharacterized conserved protein; PFAM: Roadblock/LC7 domain. | 0.974 |
ACU98318.1 | ACU98321.1 | Svir_33540 | Svir_33570 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.944 |
ACU98318.1 | ACU98388.1 | Svir_33540 | Svir_34240 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | PFAM: Protein of unknown function (DUF742). | 0.780 |
ACU98318.1 | ACU98391.1 | Svir_33540 | Svir_34270 | Predicted GTPase; PFAM: Conserved hypothetical ATP binding protein. | PFAM: Protein of unknown function (DUF742). | 0.772 |
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