STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU98347.1Short-chain dehydrogenase of unknown substrate specificity; PFAM: short chain dehydrogenase; alpha/beta hydrolase fold. (568 aa)    
Predicted Functional Partners:
ACU97659.1
Hypothetical protein.
  
    0.685
ACU96784.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
 
 
 0.625
ACU98348.1
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.522
ACU97871.1
Predicted flavoprotein involved in K+ transport.
 
 0.503
ACU96863.1
PFAM: Condensation domain; AMP-binding enzyme; TIGRFAM: non-ribosomal peptide synthase domain TIGR01720; amino acid adenylation domain.
  
 
 0.493
ACU96864.1
PFAM: Condensation domain; AMP-binding enzyme; TIGRFAM: non-ribosomal peptide synthase domain TIGR01720; amino acid adenylation domain.
  
 
 0.493
ACU98450.1
Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
  
 0.493
ACU98349.1
Penicillin-binding protein, beta-lactamase class C; PFAM: Beta-lactamase.
       0.487
ACU95777.1
Cytochrome P450; PFAM: Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase NAD-binding domain; Cytochrome P450.
  
 
 0.470
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
 
 0.465
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.