STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU98481.1PFAM: Protein kinase domain. (531 aa)    
Predicted Functional Partners:
ACU96094.1
PFAM: Protein phosphatase 2C.
 
 0.844
ACU95130.1
PFAM: Protein phosphatase 2C.
 
 0.843
ACU96974.1
PFAM: Protein phosphatase 2C; MerR family regulatory protein.
 
 0.837
ACU97267.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.790
ACU97780.1
PFAM: PASTA domain; Protein kinase domain.
 
 
0.572
ACU95126.1
PFAM: Protein kinase domain; PASTA domain.
 
 
0.567
ACU98905.1
Hypothetical protein.
 
     0.523
ACU95131.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.501
ACU95132.1
FHA domain-containing protein; PFAM: FHA domain.
 
 
 
 0.429
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.