STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU98582.1PFAM: Prolyl oligopeptidase family. (609 aa)    
Predicted Functional Partners:
ACU96588.1
PFAM: Helix-turn-helix.
  
     0.643
ACU98720.1
Hypothetical protein.
  
     0.639
ACU98581.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
 
     0.614
ACU96526.1
PFAM: Streptomyces sporulation and cell division protein, SsgA.
  
     0.593
ACU98067.1
PFAM: Sporulation and spore germination; Lipoprotein LpqB beta-propeller domain.
  
     0.505
ACU97484.1
Predicted phosphoesterase, ICC; PFAM: Calcineurin-like phosphoesterase.
  
     0.498
ACU96666.1
Transcriptional regulator.
  
     0.468
ACU95121.1
Hypothetical protein.
  
     0.458
ACU97200.1
Hypothetical protein.
  
     0.427
ACU97813.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.