STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU98674.1Predicted transcriptional regulator; PFAM: Penicillinase repressor. (127 aa)    
Predicted Functional Partners:
ACU98673.1
Zn-dependent protease with chaperone function; PFAM: Peptidase family M48.
 
    0.965
ACU98625.1
Copper chaperone; PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein.
  
  
 0.744
ACU98672.1
Hypothetical protein.
       0.675
ACU98675.1
PFAM: Domain of unknown function (DUF1963).
       0.493
ACU98516.1
Predicted transcriptional regulator; PFAM: MerR, DNA binding; MerR family regulatory protein.
 
   
 0.480
ACU95196.1
PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD.
       0.407
ACU96481.1
Protein tyrosine/serine phosphatase.
  
     0.401
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.