STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU98781.1PFAM: Aromatic-ring-opening dioxygenase LigAB, LigA subunit; TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit. (116 aa)    
Predicted Functional Partners:
ACU98780.1
Protocatechuate 4,5-dioxygenase beta subunit; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
  
  0.999
ACU96221.1
PFAM: Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
  
  
  0.967
ACU98269.1
PFAM: Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
  
  
  0.966
ACU97653.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase.
 
 
 0.947
ACU96348.1
PFAM: Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit.
    
 0.906
ACU96349.1
PFAM: Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit.
    
 0.906
ACU98784.1
4-carboxy-4-hydroxy-2-oxoadipate aldolase; PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase.
 
   
 0.905
ACU98783.1
Predicted hydrolase or acyltransferase of alpha/beta superfamily.
 
  
 0.860
ACU98782.1
PFAM: Muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase.
 
   
 0.828
ACU98785.1
Uncharacterized LmbE-like protein; PFAM: GlcNAc-PI de-N-acetylase.
 
     0.817
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.