STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU98859.1PFAM: Predicted permease. (745 aa)    
Predicted Functional Partners:
ACU98860.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.934
ACU95462.1
Hypothetical protein.
  
     0.741
ACU98160.1
Hypothetical protein.
  
     0.719
ACU95528.1
Hypothetical protein.
  
     0.702
ACU98900.1
Hypothetical protein.
  
     0.699
ACU98861.1
PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
    0.665
ACU95203.1
Hypothetical protein.
  
     0.653
ACU98453.1
PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457).
  
     0.640
ACU95573.1
Hypothetical protein.
  
     0.623
ACU98862.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
     0.612
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.