STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACU98877.1Predicted integral membrane protein. (535 aa)    
Predicted Functional Partners:
ACU98876.1
Membrane carboxypeptidase (penicillin-binding protein); PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase.
 
    0.850
ACU96646.1
Hypothetical protein.
 
     0.703
ACU97707.1
Hypothetical protein.
  
     0.672
ACU97874.1
Hypothetical protein.
  
     0.650
ACU97439.1
Hypothetical protein.
  
     0.630
ACU95932.1
ACT domain-containing protein; PFAM: ACT domain.
  
     0.614
ACU98903.1
Hypothetical protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
  
     0.599
ACU95715.1
Hypothetical protein.
  
     0.593
ACU98716.1
PFAM: Protein of unknown function (DUF1416).
  
     0.582
ACU97900.1
PFAM: Domain of unknown function (DUF2017).
  
     0.576
Your Current Organism:
Saccharomonospora viridis
NCBI taxonomy Id: 471857
Other names: S. viridis DSM 43017, Saccharomonospora viridis ATCC 15386, Saccharomonospora viridis DSM 43017, Saccharomonospora viridis NCIB 9602, Saccharomonospora viridis NRRL B-3044, Saccharomonospora viridis str. DSM 43017, Saccharomonospora viridis strain DSM 43017
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.