Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDV07633.1 | EDV07634.1 | BACINT_00029 | BACINT_00030 | Putative DNA-binding protein; COG: NOG29822 non supervised orthologous group. | Hypothetical protein. | 0.549 |
EDV07633.1 | trpS | BACINT_00029 | BACINT_00028 | Putative DNA-binding protein; COG: NOG29822 non supervised orthologous group. | tryptophan--tRNA ligase; KEGG: bfr:BF4036 2.5e-174 tryptophanyl-tRNA synthetase K01867; COG: COG0180 Tryptophanyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.598 |
EDV07634.1 | EDV07633.1 | BACINT_00030 | BACINT_00029 | Hypothetical protein. | Putative DNA-binding protein; COG: NOG29822 non supervised orthologous group. | 0.549 |
EDV07634.1 | trpS | BACINT_00030 | BACINT_00028 | Hypothetical protein. | tryptophan--tRNA ligase; KEGG: bfr:BF4036 2.5e-174 tryptophanyl-tRNA synthetase K01867; COG: COG0180 Tryptophanyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.416 |
trpS | EDV07633.1 | BACINT_00028 | BACINT_00029 | tryptophan--tRNA ligase; KEGG: bfr:BF4036 2.5e-174 tryptophanyl-tRNA synthetase K01867; COG: COG0180 Tryptophanyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family. | Putative DNA-binding protein; COG: NOG29822 non supervised orthologous group. | 0.598 |
trpS | EDV07634.1 | BACINT_00028 | BACINT_00030 | tryptophan--tRNA ligase; KEGG: bfr:BF4036 2.5e-174 tryptophanyl-tRNA synthetase K01867; COG: COG0180 Tryptophanyl-tRNA synthetase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-I aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.416 |