STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV07661.1SusD family protein; COG: NOG27516 non supervised orthologous group. (571 aa)    
Predicted Functional Partners:
EDV07660.1
TonB-linked outer membrane protein, SusC/RagA family; KEGG: eci:UTI89_C1627 0.0025 entS; EntS/YbdA MFS transporter; COG: NOG06412 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
 
   
 0.952
EDV04004.1
TonB-linked outer membrane protein, SusC/RagA family; KEGG: eci:UTI89_C1627 0.0034 entS; EntS/YbdA MFS transporter; COG: NOG06412 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
 
  
 0.830
EDV04001.1
Hypothetical protein; KEGG: aha:AHA_0837 0.0038 alpha-amylase K01176.
 
  
 0.823
EDV05008.1
Alpha amylase, catalytic domain protein; KEGG: sru:SRU_2409 1.6e-131 glycosyl hydrolase, family 13, putative K00701; COG: COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.734
EDV03998.1
Alpha amylase, catalytic domain protein; KEGG: sru:SRU_2409 9.3e-129 glycosyl hydrolase, family 13, putative K00701; COG: COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.724
EDV03882.1
TonB-dependent receptor plug domain protein; COG: NOG25252 non supervised orthologous group.
  
   
 0.715
EDV03995.1
Alpha amylase, catalytic domain protein; KEGG: ava:Ava_4479 1.5e-40 glycoside hydrolase, family 13-like K00700; COG: COG0296 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
 
     0.711
EDV06486.1
SusD family protein.
  
    0.708
EDV07330.1
TonB-linked outer membrane protein, SusC/RagA family; COG: NOG06407 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
 
  
 0.689
EDV07662.1
Gram-positive signal peptide protein, YSIRK family; KEGG: dre:394075 0.00017 zgc:56080 K03103; COG: NOG06550 non supervised orthologous group.
       0.687
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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