STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV07567.1Hypothetical protein; KEGG: xac:XAC3313 4.4e-55 susB; alpha-glucosidase K01187; COG: NOG26813 non supervised orthologous group. (975 aa)    
Predicted Functional Partners:
EDV07566.1
Carbohydrate binding domain protein; KEGG: sus:Acid_2992 2.6e-69 alpha-N-arabinofuranosidase K01209; COG: COG3534 Alpha-L-arabinofuranosidase.
 
     0.830
EDV07565.1
Carbohydrate binding domain protein; KEGG: sus:Acid_2992 3.7e-86 alpha-N-arabinofuranosidase K01209; COG: COG3534 Alpha-L-arabinofuranosidase.
 
     0.805
EDV07568.1
Glycosyl hydrolase, family 43; KEGG: rha:RHA1_ro05391 7.3e-17 probable arabinan endo-1,5-alpha-L-arabinosidase; COG: COG3507 Beta-xylosidase.
 
    
0.749
EDV06011.1
COG: COG3533 Uncharacterized protein conserved in bacteria.
 
     0.747
EDV03658.1
COG: COG3533 Uncharacterized protein conserved in bacteria.
 
     0.746
EDV06008.1
COG: COG3533 Uncharacterized protein conserved in bacteria.
 
     0.744
EDV07563.1
Glycosyl hydrolase, family 43; KEGG: shm:Shewmr7_1980 1.1e-06 arabinan endo-1,5-alpha-L-arabinosidase; COG: COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.733
EDV07570.1
Hypothetical protein.
 
     0.673
EDV06953.1
COG: COG3533 Uncharacterized protein conserved in bacteria.
 
     0.596
EDV03381.1
Hypothetical protein; COG: NOG19133 non supervised orthologous group.
 
     0.568
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.