Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDV07589.1Hypothetical protein; KEGG: pat:Patl_0842 1.5e-25 alpha-L-arabinofuranosidase K01209; COG: COG3507 Beta-xylosidase. (146 aa)    
Predicted Functional Partners:
EDV07587.1
Hypothetical protein; KEGG: oih:OB2087 1.5e-16 arabinofuranosidase K01198:K01209; COG: COG3507 Beta-xylosidase.
 
     0.840
EDV07585.1
Hypothetical protein; KEGG: bcl:ABC1148 1.2e-46 xylosidase/arabinosidase K01198:K01209; COG: COG3507 Beta-xylosidase.
     0.825
EDV04196.1
Hypothetical protein; KEGG: oih:OB2087 1.2e-21 arabinofuranosidase K01198:K01209; COG: COG3507 Beta-xylosidase.
 
     0.511
EDV05014.1
COG: COG4430 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.96.
  
     0.467
EDV07586.1
Hypothetical protein; KEGG: pat:Patl_0842 9.5e-05 alpha-L-arabinofuranosidase K01209.
       0.464
EDV07588.1
Hypothetical protein; KEGG: pat:Patl_0842 5.8e-05 alpha-L-arabinofuranosidase K01209.
       0.464
EDV04010.1
Hypothetical protein; COG: COG3934 Endo-beta-mannanase.
 
  
 0.463
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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