STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV06960.1Fic family protein; COG: COG3177 Uncharacterized conserved protein. (367 aa)    
Predicted Functional Partners:
EDV06959.1
Hypothetical protein.
       0.773
EDV04804.1
Fic family protein; COG: COG3177 Uncharacterized conserved protein.
  
     0.582
EDV06958.1
COG: COG3533 Uncharacterized protein conserved in bacteria.
     
 0.534
EDV06961.1
Hypothetical protein.
       0.453
EDV06962.1
Hypothetical protein; KEGG: xac:XAC3313 3.5e-90 susB; alpha-glucosidase K01187; COG: NOG06228 non supervised orthologous group.
       0.435
EDV06378.1
Hypothetical protein.
   
 
 0.417
EDV06381.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.49.
   
 
 0.417
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.417
EDV06956.1
SusD family protein; COG: NOG27516 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
       0.406
EDV06957.1
TonB-linked outer membrane protein, SusC/RagA family; KEGG: shn:Shewana3_3063 0.0012 phosphatidylglycerophosphatase K01094; COG: NOG06412 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
       0.406
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.