STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV06979.1Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 5.9e-63 yicJ; hypothetical symporter YicJ K03292; COG: COG2211 Na+/melibiose symporter and related transporters; Psort location: CytoplasmicMembrane, score: 10.00. (460 aa)    
Predicted Functional Partners:
EDV06980.1
Hypothetical protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.
 
   
 0.868
EDV06981.1
Glycosyl hydrolase family 26; KEGG: bfs:BF0771 5.9e-143 manA; putative mannosidase K01218; COG: COG4124 Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.816
EDV06978.1
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
  
 0.776
EDV06982.1
Uroporphyrinogen decarboxylase (URO-D); KEGG: mac:MA0146 4.6e-24 mtbA; methylcobalamin:CoM methyltransferase isozyme A K00599; COG: COG0407 Uroporphyrinogen-III decarboxylase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.552
EDV06984.1
B12 binding domain protein; KEGG: sit:TM1040_1470 2.4e-43 5-methyltetrahydrofolate--homocysteine S-methyltransferase K00548; COG: COG5012 Predicted cobalamin binding protein.
  
  
 0.543
EDV06983.1
Vitamin B12 dependent methionine synthase, activation domain protein; KEGG: ctc:CTC01807 1.1e-09 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548; COG: NOG21937 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
    0.536
EDV06988.1
Glycosyl hydrolase family 26; KEGG: bfs:BF0771 1.8e-54 manA; putative mannosidase K01218; COG: COG4124 Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.519
EDV06987.1
Hypothetical protein; COG: COG3934 Endo-beta-mannanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.496
EDV06985.1
Hypothetical protein; KEGG: syn:slr0536 0.0029 hemE; uroporphyrinogen decarboxylase K01599; COG: NOG13231 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.490
EDV06986.1
Glycosyl hydrolase family 3 C-terminal domain protein; KEGG: bfs:BF0766 0. putative beta-glucosidase K05349; COG: COG1472 Beta-glucosidase-related glycosidases; Psort location: Periplasmic, score: 9.44; Belongs to the glycosyl hydrolase 3 family.
     
 0.470
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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