STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV07013.1Efflux ABC transporter, permease protein; KEGG: rru:Rru_A3236 1.8e-34 hypothetical protein K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00. (414 aa)    
Predicted Functional Partners:
EDV07015.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0337 3.3e-53 ATPase K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.981
EDV07012.1
Efflux transporter, RND family, MFP subunit; COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.951
EDV03496.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL6466 1.3e-60 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.935
EDV02915.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: rru:Rru_A3236 6.2e-52 hypothetical protein K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.913
EDV03181.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 9.8e-54 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.909
EDV04221.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0988 6.9e-53 ATPase K02003; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.897
EDV03139.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; KEGG: fal:FRAAL6466 6.2e-52 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.884
EDV07014.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 2.0e-29 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
0.882
EDV03495.1
Efflux transporter, RND family, MFP subunit; COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.824
EDV07011.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score: 10.00.
 
 
 0.803
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.