STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV07015.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_0337 3.3e-53 ATPase K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82. (238 aa)    
Predicted Functional Partners:
EDV07013.1
Efflux ABC transporter, permease protein; KEGG: rru:Rru_A3236 1.8e-34 hypothetical protein K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.981
EDV03497.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 1.9e-80 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.978
EDV07014.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 2.0e-29 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.970
EDV07012.1
Efflux transporter, RND family, MFP subunit; COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.920
EDV02916.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.868
EDV02918.1
KEGG: pen:PSEEN3042 0.00094 macB; macrolide ABC efflux protein MacB; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.868
EDV04215.1
Efflux ABC transporter, permease protein; KEGG: bur:Bcep18194_B0724 4.7e-14 hypothetical protein K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.825
EDV04223.1
Efflux ABC transporter, permease protein; KEGG: bur:Bcep18194_B0724 4.5e-08 hypothetical protein K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.820
EDV04220.1
KEGG: pen:PSEEN3665 1.5e-08 efflux ABC transporter, ATP-binding/permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.807
EDV04227.1
KEGG: pen:PSEEN3665 1.2e-11 efflux ABC transporter, ATP-binding/permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.806
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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