STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaAKEGG: bth:BT3764 2.7e-193 L-rhamnose isomerase K01813; COG: COG4806 L-rhamnose isomerase; Psort location: Cytoplasmic, score: 8.96. (417 aa)    
Predicted Functional Partners:
EDV07036.1
Putative rhamnulokinase; KEGG: bth:BT3763 3.8e-210 rhamnulose kinase/L-fuculose kinase K00848; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.995
EDV06827.1
Carbohydrate kinase, FGGY family protein; KEGG: bfr:BF0256 5.4e-172 L-fuculose kinase K00848; COG: COG1070 Sugar (pentulose and hexulose) kinases; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.990
RhaD
KEGG: bth:BT3766 2.1e-124 rhamnulose-1-phosphate aldolase K01629; COG: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
  
 0.946
rhaU
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.928
rhaU-2
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.925
RhaT
L-rhamnose-proton symport protein (RhaT); KEGG: atu:Atu1379 0.0018 cdsA; phosphatidate cytidylyltransferase K00981; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.837
EDV05867.1
Hypothetical protein; COG: NOG17712 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.801
EDV06828.1
Hypothetical protein; KEGG: msm:MSMEG_0587 3.3e-07 rhaU; L-rhamnose 1-epimerase; COG: NOG17712 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.801
EDV03058.1
Carbohydrate kinase, FGGY family protein; KEGG: bth:BT0792 2.3e-244 xylulose kinase (xylulokinase) K00854; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
  
 0.598
EDV03657.1
Carbohydrate kinase, FGGY family protein; KEGG: lsa:LSA1859 3.3e-156 araB; L-ribulokinase K00853; COG: COG1070 Sugar (pentulose and hexulose) kinases.
  
  
 0.598
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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