STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV07185.1KEGG: bfr:BF2021 1.6e-12 peptidyl-prolyl cis-trans isomerase K01802; COG: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1. (210 aa)    
Predicted Functional Partners:
glyS
glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.777
HtpG
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: eci:UTI89_C0501 8.6e-71 htpG; chaperone HSP90, heat shock protein C 62.5 K04079; COG: COG0326 Molecular chaperone, HSP90 family; Psort location: Cytoplasmic, score: 9.26.
   
 0.716
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
   
   0.561
EDV05691.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 0.493
EDV07189.1
DNA gyrase/topoisomerase IV, A subunit; KEGG: bth:BT3579 0. topoisomerase IV subunit A K01864; COG: COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.467
SprA
Hypothetical protein; COG: NOG25484 non supervised orthologous group.
    
 
 0.465
EDV07184.1
Hypothetical protein; COG: COG1373 Predicted ATPase (AAA+ superfamily).
       0.455
EDV05819.1
NOL1/NOP2/sun family protein; KEGG: lsl:LSL_0999 3.1e-50 putative 23S rRNA m(5)C methyltransferase K00599; COG: COG0144 tRNA and rRNA cytosine-C5-methylases.
 
 
 0.452
EDV07191.1
Peptidase, S41 family; KEGG: ccr:CC2028 1.2e-11 carboxyl-terminal processing protease K03797; COG: COG0793 Periplasmic protease.
     
 0.446
ThrA
KEGG: bth:BT2403 0. homoserine dehydrogenase / aspartate kinase K00003:K00928; COG: COG0527 Aspartokinases; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.443
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.