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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV05851.1TonB-linked outer membrane protein, SusC/RagA family; KEGG: shn:Shewana3_3063 0.0080 phosphatidylglycerophosphatase K01094; COG: NOG25041 non supervised orthologous group; Psort location: OuterMembrane, score: 10.00. (1084 aa)    
Predicted Functional Partners:
EDV05850.1
SusD family protein; COG: NOG30008 non supervised orthologous group.
 
 
   0.951
EDV05849.1
Hypothetical protein.
 
     0.930
EDV06476.1
SusD family protein; COG: NOG30008 non supervised orthologous group.
 
 
   0.801
EDV05611.1
SusD family protein; COG: NOG30008 non supervised orthologous group.
 
 
   0.801
EDV07095.1
SusD family protein; COG: NOG30008 non supervised orthologous group.
  
 
   0.788
EDV06465.1
SusD family protein; COG: NOG28830 non supervised orthologous group.
  
 
   0.776
EDV06477.1
Hypothetical protein.
 
     0.776
EDV05894.1
SusD family protein; COG: NOG37591 non supervised orthologous group.
  
 
   0.775
EDV07581.1
SusD family protein; COG: NOG27384 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
 
 
   0.762
EDV03647.1
SusD family protein.
  
 
   0.761
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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