STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV06421.1Acyltransferase; KEGG: mlo:mlr8757 5.3e-05 acetyl transferase, nodulation protein NolL K00680; COG: COG3594 Fucose 4-O-acetylase and related acetyltransferases; Psort location: CytoplasmicMembrane, score: 10.00. (310 aa)    
Predicted Functional Partners:
EDV04762.1
Resolvase, N-terminal domain protein; COG: COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.749
EDV04156.1
Transposase, IS4 family; COG: NOG19662 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
    0.728
EDV05007.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 1.9e-06 serine/threonine protein kinase with TPR repeats K00908; COG: COG0457 FOG: TPR repeat; Psort location: OuterMembrane, score: 9.52.
  
     0.654
EDV05508.1
SusD family protein; COG: NOG32594 non supervised orthologous group.
  
     0.643
EDV04658.1
TonB family domain protein; COG: NOG19138 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.614
EDV05124.1
Hypothetical protein; COG: NOG26638 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
  
     0.596
EDV05661.1
Fibrobacter succinogene major paralogous domain protein; COG: NOG09703 non supervised orthologous group.
  
     0.596
EDV05570.1
Hypothetical protein; COG: NOG09947 non supervised orthologous group.
  
     0.595
EDV07795.1
Hypothetical protein; COG: NOG30041 non supervised orthologous group.
  
     0.591
EDV06107.1
Hypothetical protein.
  
     0.576
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.