STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV06886.1Tetratricopeptide repeat protein; KEGG: eci:UTI89_C0725 0.0097 hypothetical protein K00754; COG: NOG22299 non supervised orthologous group. (279 aa)    
Predicted Functional Partners:
EDV06885.1
Hypothetical protein; COG: NOG06393 non supervised orthologous group.
  
 0.991
EDV06883.1
Von Willebrand factor type A domain protein; KEGG: eci:UTI89_C2553 6.2e-07 yfbK; hypothetical protein YfbK; COG: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; Psort location: CytoplasmicMembrane, score: 9.46.
 
   
 0.951
EDV06881.1
Hypothetical protein; COG: NOG14440 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.83.
 
  
 0.932
EDV06884.1
Tetratricopeptide repeat protein; KEGG: rno:309804 5.3e-13 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; COG: NOG14439 non supervised orthologous group.
 
   
 0.931
EDV06882.1
Von Willebrand factor type A domain protein; KEGG: mka:MK0192 0.0011 chlI, chlD; Mg-chelatase subunit ChlI and Chld (MoxR-like ATPase and vWF domain) K03404:K03405; COG: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; Psort location: CytoplasmicMembrane, score: 9.46.
 
   
 0.912
EDV06880.1
Hypothetical protein; COG: COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain); Psort location: Cytoplasmic, score: 8.96.
 
     0.882
EDV06887.1
Hypothetical protein; COG: NOG19094 non supervised orthologous group.
 
     0.711
EDV07487.1
OmpA family protein; COG: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Psort location: OuterMembrane, score: 9.92.
  
  
 0.691
EDV06879.1
ATPase family associated with various cellular activities (AAA); KEGG: pgi:PG1579 2.2e-134 ATPase, MoxR family K03924; COG: COG0714 MoxR-like ATPases; Psort location: Cytoplasmic, score: 9.97.
 
    0.671
EDV04741.1
YbbR-like protein; COG: NOG14472 non supervised orthologous group.
  
     0.578
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.