STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV06903.1Type I restriction enzyme HsdR protein N-terminal domain protein; COG: NOG14438 non supervised orthologous group. (149 aa)    
Predicted Functional Partners:
holA
KEGG: bfr:BF2396 7.8e-164 DNA polymerase III delta subunit K02340; COG: COG1466 DNA polymerase III, delta subunit.
 
     0.848
EDV03271.1
Hypothetical protein; COG: NOG14434 non supervised orthologous group.
  
     0.772
EDV05767.1
Hypothetical protein; KEGG: mja:MJ0984 0.0030 restriction enzyme, type II R/M system 1 K01155; COG: NOG11645 non supervised orthologous group.
  
     0.736
EDV04739.1
Hypothetical protein; KEGG: nph:NP3508A 0.0087 ndh; probable NADH dehydrogenase K03885; COG: NOG14473 non supervised orthologous group.
  
     0.732
EDV04972.1
Hypothetical protein; COG: NOG14471 non supervised orthologous group.
  
     0.719
EDV06902.1
KEGG: bfr:BF2395 7.1e-131 AMP nucleosidase K01241; COG: COG0775 Nucleoside phosphorylase.
       0.712
hemD
KEGG: chu:CHU_0169 1.8e-70 hemD; uroporphyrinogen-III synthase K01719; COG: NOG11648 non supervised orthologous group.
  
     0.665
mreD
Rod shape-determining protein MreD; COG: NOG32523 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.657
EDV06297.1
GH3 auxin-responsive promoter; COG: NOG06410 non supervised orthologous group.
  
     0.654
EDV07316.1
Hypothetical protein; KEGG: gme:Gmet_0415 7.8e-06 D-alanine--D-alanine ligase K01921; COG: NOG14462 non supervised orthologous group.
  
     0.651
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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