STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV02900.1Conserved hypothetical protein TIGR00245; COG: COG0390 ABC-type uncharacterized transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00. (269 aa)    
Predicted Functional Partners:
EDV02901.1
KEGG: sau:SA1674 2.8e-24 glutamate ABC transporter ATP-binding protein K02028; COG: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; Psort location: CytoplasmicMembrane, score: 9.82.
 
    0.865
EDV02902.1
COG: COG4739 Uncharacterized protein containing a ferredoxin domain; Psort location: Cytoplasmic, score: 8.96.
       0.684
EDV02903.1
Hypothetical protein; KEGG: pen:PSEEN0261 1.3e-44 aguA; agmatine deiminase; COG: COG2957 Peptidylarginine deiminase and related enzymes; Psort location: Cytoplasmic, score: 8.96.
       0.684
EDV02904.1
Hydrolase, carbon-nitrogen family; KEGG: pha:PSHAa1835 1.8e-109 beta-ureidopropionase K01431; COG: COG0388 Predicted amidohydrolase.
       0.676
EDV02897.1
Putative zinc ribbon domain protein; KEGG: cal:orf19.2410 2.2e-05 IMH1; involved in vesicular transport K01553; COG: COG1579 Zn-ribbon protein, possibly nucleic acid-binding; Psort location: Cytoplasmic, score: 8.96.
       0.429
EDV02899.1
Dinuclear metal center protein, YbgI family; COG: COG0327 Uncharacterized conserved protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
       0.429
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.