Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EDV02978.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
EDV02979.1
Hypothetical protein; COG: NOG09947 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
       0.794
EDV02977.1
KEGG: bth:BT2324 9.4e-223 DNA topoisomerase III K03169; COG: COG0550 Topoisomerase IA.
       0.753
EDV02975.1
Hypothetical protein; COG: NOG19108 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
       0.560
EDV02974.1
Helicase C-terminal domain protein; KEGG: bfs:BF1838 7.9e-06 hsdM; putative type I restriction enzyme methylase K03427; COG: COG4646 DNA methylase; Psort location: Cytoplasmic, score: 8.96.
       0.536
EDV02980.1
COG: COG0582 Integrase; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
       0.424
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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