STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03093.1Alpha amylase, catalytic domain protein; KEGG: pha:PSHAa1355 4.7e-118 glycosidase K01234; COG: COG0366 Glycosidases; Psort location: Cytoplasmic, score: 9.26. (565 aa)    
Predicted Functional Partners:
EDV03092.1
Phospholipase, patatin family; KEGG: reh:H16_A2404 2.5e-23 predicted esterase of the alpha-beta hydrolase superfamily; COG: COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
     
 0.848
EDV03090.1
Tat pathway signal sequence domain protein; COG: COG2006 Uncharacterized conserved protein.
       0.608
EDV04252.1
Putative glutamate/gamma-aminobutyrate antiporter; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.590
EDV04253.1
Hypothetical protein; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.590
pulA
Pullulanase, type I; KEGG: bth:BT4689 1.2e-192 pullulanase precursor K01200; COG: COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; Psort location: Cytoplasmic, score: 9.26; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.549
EDV03091.1
KEGG: eci:UTI89_C2486 2.6e-18 napF; ferredoxin-type protein: electron transfer K02572; COG: COG0348 Polyferredoxin; Psort location: CytoplasmicMembrane, score: 9.46.
  
    0.533
EDV03089.1
KEGG: csa:Csal_2097 4.0e-09 xanthine-guanine phosphoribosyltransferase K00769; COG: COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; Psort location: Cytoplasmic, score: 8.96.
       0.527
EDV03088.1
Hypothetical protein; COG: NOG23376 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
       0.491
EDV03097.1
Alpha amylase, catalytic domain protein; KEGG: bth:BT0771 0. 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) K00700; COG: COG0296 1,4-alpha-glucan branching enzyme; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.456
EDV06747.1
Starch synthase; KEGG: sat:SYN_00879 3.3e-101 glycogen synthase/glycogen phosphorylase K00688:K00693; COG: COG0438 Glycosyltransferase.
 
 
 0.444
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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