STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03285.1Hypothetical protein; KEGG: rru:Rru_A1634 0.0030 NADH dehydrogenase (quinone) K05903; COG: NOG36602 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00. (308 aa)    
Predicted Functional Partners:
EDV03286.1
Hypothetical protein; COG: NOG37347 non supervised orthologous group.
 
    0.958
EDV03287.1
Hypothetical protein; COG: NOG26634 non supervised orthologous group.
 
     0.956
EDV03284.1
Membrane protein; COG: COG1300 Uncharacterized membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.901
EDV03289.1
Hypothetical protein; COG: COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.874
EDV03283.1
RDD family protein; KEGG: rba:RB7928 0.0016 pknB; probable serine/threonine protein kinase K00924; COG: COG1714 Predicted membrane protein/domain; Psort location: CytoplasmicMembrane, score: 9.46.
 
     0.857
EDV03288.1
ATPase family associated with various cellular activities (AAA); KEGG: chu:CHU_2136 4.0e-89 yieN; MoxR-like ATPase, possible regulator K03924; COG: COG0714 MoxR-like ATPases; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.831
EDV05915.1
DnaD domain protein; COG: NOG19076 non supervised orthologous group.
  
     0.753
EDV05142.1
Phage integrase SAM-like domain protein; COG: COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.751
EDV03684.1
Putative glycosyl hydrolase family 10.
  
     0.745
EDV04819.1
KEGG: chu:CHU_1410 9.8e-06 hypothetical protein K00689; COG: NOG22466 non supervised orthologous group.
  
     0.737
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.