Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDV03287.1Hypothetical protein; COG: NOG26634 non supervised orthologous group. (404 aa)    
Predicted Functional Partners:
EDV03284.1
Membrane protein; COG: COG1300 Uncharacterized membrane protein; Psort location: CytoplasmicMembrane, score: 10.00.
     0.964
EDV03286.1
Hypothetical protein; COG: NOG37347 non supervised orthologous group.
 
     0.958
EDV03289.1
Hypothetical protein; COG: COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
    0.957
EDV03285.1
Hypothetical protein; KEGG: rru:Rru_A1634 0.0030 NADH dehydrogenase (quinone) K05903; COG: NOG36602 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.951
EDV03283.1
RDD family protein; KEGG: rba:RB7928 0.0016 pknB; probable serine/threonine protein kinase K00924; COG: COG1714 Predicted membrane protein/domain; Psort location: CytoplasmicMembrane, score: 9.46.
 
     0.921
EDV03288.1
ATPase family associated with various cellular activities (AAA); KEGG: chu:CHU_2136 4.0e-89 yieN; MoxR-like ATPase, possible regulator K03924; COG: COG0714 MoxR-like ATPases; Psort location: Cytoplasmic, score: 9.26.
  
    0.819
EDV03700.1
Alpha-2-macroglobulin family protein; COG: COG2373 Large extracellular alpha-helical protein.
  
     0.646
EDV06650.1
Hypothetical protein; COG: NOG18279 non supervised orthologous group.
  
     0.550
pbpC
KEGG: bth:BT0162 0. penicillin-binding protein 1C (PBP-1c) K05367; COG: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC.
  
     0.543
EDV03559.1
VirE N-terminal domain protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.532
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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