STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03304.1Hypothetical protein; COG: NOG26858 non supervised orthologous group. (533 aa)    
Predicted Functional Partners:
EDV03305.1
TonB-linked outer membrane protein, SusC/RagA family; COG: NOG24764 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
 
  
 0.951
EDV06596.1
Hypothetical protein; COG: NOG24764 non supervised orthologous group.
 
  
 0.792
EDV05499.1
TonB-linked outer membrane protein, SusC/RagA family; KEGG: shn:Shewana3_3063 0.0060 phosphatidylglycerophosphatase K01094; COG: NOG26190 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
  
 
   0.779
EDV05105.1
TonB-linked outer membrane protein, SusC/RagA family; KEGG: pfa:PF07_0123 0.0061 mRNA (N6-adenosine)-methyltransferase, putative K05925; COG: NOG26295 non supervised orthologous group; Psort location: OuterMembrane, score: 9.49.
 
  
 0.772
EDV05498.1
Hypothetical protein; COG: NOG28139 non supervised orthologous group.
  
 
   0.744
EDV06763.1
Hypothetical protein; COG: NOG28036 non supervised orthologous group.
 
 
   0.693
EDV04350.1
Hypothetical protein; COG: NOG28036 non supervised orthologous group.
 
 
   0.670
EDV06504.1
SusD family protein; COG: NOG27133 non supervised orthologous group.
  
 
 
 0.667
EDV06505.1
TonB-linked outer membrane protein, SusC/RagA family; KEGG: mge:MG_119 0.0019 mglA; simple sugar transport system ATP-binding protein K02056; Psort location: OuterMembrane, score: 9.49.
 
   
 0.655
EDV05621.1
Hypothetical protein; COG: NOG28036 non supervised orthologous group.
 
 
   0.652
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.