STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03351.1Putative DNA-binding protein; COG: NOG29624 non supervised orthologous group. (169 aa)    
Predicted Functional Partners:
EDV06632.1
Hypothetical protein; COG: NOG34048 non supervised orthologous group.
  
     0.767
EDV04436.1
Putative DNA-binding protein; COG: NOG29822 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.766
EDV03684.1
Putative glycosyl hydrolase family 10.
  
     0.703
EDV06039.1
Redoxin family protein; COG: NOG39333 non supervised orthologous group.
 
     0.695
EDV05046.1
Hypothetical protein; COG: NOG26882 non supervised orthologous group.
  
     0.661
EDV06274.1
Polysaccharide lyase family 8, super-sandwich domain protein; Broad-specificity glycosaminoglycan lyase.
  
     0.660
EDV05291.1
Hypothetical protein; COG: NOG19148 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.655
EDV06737.1
Putative DNA-binding protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.642
EDV04980.1
Tetratricopeptide repeat protein; COG: NOG09955 non supervised orthologous group.
 
     0.614
EDV03285.1
Hypothetical protein; KEGG: rru:Rru_A1634 0.0030 NADH dehydrogenase (quinone) K05903; COG: NOG36602 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.609
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.