STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03368.1Hypothetical protein; KEGG: afu:AF1833 7.9e-09 F420H2:quinone oxidoreductase, 39 kDa subunit, putative K00344; COG: COG1035 Coenzyme F420-reducing hydrogenase, beta subunit. (394 aa)    
Predicted Functional Partners:
EDV03934.1
Hypothetical protein; KEGG: efa:EF2489 3.2e-28 MurB family protein K00075; COG: NOG11144 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
    0.914
EDV03366.1
Hypothetical protein; KEGG: efa:EF2489 8.9e-16 MurB family protein K00075; COG: NOG19084 non supervised orthologous group.
     0.893
EDV03370.1
Hypothetical protein; COG: NOG25117 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.834
EDV03367.1
Hypothetical protein.
       0.773
EDV03369.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_02660 9.8e-18 glycosyltransferase K00754; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis; Psort location: Cytoplasmic, score: 8.96.
       0.746
GltB
Class II glutamine amidotransferase; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; COG: COG0069 Glutamate synthase domain 2; Psort location: OuterMembrane, score: 9.49.
  
 
 0.633
EDV03364.1
Glycosyltransferase, group 1 family protein; KEGG: hit:NTHI2005 1.9e-17 lsgC; putative UDP-galactose--lipooligosaccharide galactosyltransferase K02840; COG: COG0438 Glycosyltransferase.
       0.460
EDV03365.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.450
EDV03363.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.439
EDV03362.1
Hypothetical protein; KEGG: mma:MM0768 1.8e-38 glycosyltransferase K00754; COG: NOG08640 non supervised orthologous group.
       0.424
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.