STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03587.1TonB-linked outer membrane protein, SusC/RagA family; Psort location: OuterMembrane, score: 9.52. (1051 aa)    
Predicted Functional Partners:
EDV03586.1
SusD family protein; COG: NOG37591 non supervised orthologous group.
 
     0.961
EDV03588.1
KEGG: bth:BT0453 2.2e-198 N-acylglucosamine 2-epimerase K01787; COG: COG2942 N-acyl-D-glucosamine 2-epimerase.
 
     0.823
EDV03882.1
TonB-dependent receptor plug domain protein; COG: NOG25252 non supervised orthologous group.
  
  
 0.772
EDV05866.1
SusD family protein; COG: NOG28830 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
  
     0.770
EDV03647.1
SusD family protein.
  
     0.770
EDV03649.1
SusD family protein.
  
     0.768
EDV05251.1
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; COG: NOG24756 non supervised orthologous group.
  
   
 0.768
EDV06465.1
SusD family protein; COG: NOG28830 non supervised orthologous group.
  
     0.767
EDV05894.1
SusD family protein; COG: NOG37591 non supervised orthologous group.
  
     0.765
EDV03868.1
Hypothetical protein; COG: NOG25847 non supervised orthologous group.
 
     0.763
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.