STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03684.1Putative glycosyl hydrolase family 10. (738 aa)    
Predicted Functional Partners:
EDV03685.1
O-Glycosyl hydrolase family 30; KEGG: chu:CHU_2042 4.0e-50 CHU large protein, candidate xylanase, CBM9 module, glycoside hydrolase family 5 protein K01238; COG: COG5520 O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.929
EDV03683.1
Hypothetical protein.
 
     0.911
EDV03681.1
TonB-linked outer membrane protein, SusC/RagA family; COG: NOG26114 non supervised orthologous group; Psort location: OuterMembrane, score: 9.52.
 
     0.892
EDV03682.1
SusD family protein.
 
   
 0.881
EDV03680.1
SusD family protein.
 
   
 0.862
EDV03679.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.851
EDV05263.1
Hypothetical protein.
  
   
 0.763
EDV05915.1
DnaD domain protein; COG: NOG19076 non supervised orthologous group.
  
     0.753
EDV03285.1
Hypothetical protein; KEGG: rru:Rru_A1634 0.0030 NADH dehydrogenase (quinone) K05903; COG: NOG36602 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.745
EDV04990.1
Hypothetical protein; COG: NOG22764 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.46.
  
     0.744
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.