STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDV03796.1Hypothetical protein; COG: NOG14624 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96. (163 aa)    
Predicted Functional Partners:
EDV03797.1
COG: COG3209 Rhs family protein.
       0.581
EDV03823.1
Hypothetical protein; KEGG: eci:UTI89_C2878 3.9e-43 yfhD; putative periplasmic binding transport protein K01238; COG: COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein.
 
     0.511
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
  
 0.447
udk
Uridine kinase; KEGG: bfs:BF3035 6.9e-101 udk; uridine kinase K00876; COG: COG0572 Uridine kinase; Psort location: Cytoplasmic, score: 8.96.
  
    0.443
EDV05040.1
Hypothetical protein; KEGG: cpf:CPF_1523 0.0023 sensory box histidine kinase; COG: NOG14470 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.96.
  
     0.441
hisG
ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
       0.429
EDV03821.1
Hypothetical protein; COG: NOG17822 non supervised orthologous group.
       0.429
EDV03798.1
Hypothetical protein; KEGG: cpf:CPF_0545 2.6e-14 putative N-acetylmuramoyl-L-alanine amidase K01446; COG: COG3023 Negative regulator of beta-lactamase expression; Psort location: Cytoplasmic, score: 8.96.
       0.422
hisC
Putative histidinol-phosphate transaminase; KEGG: bth:BT0202 9.0e-163 histidinol-phosphate aminotransferase K00817; COG: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; Psort location: Cytoplasmic, score: 8.96; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.407
EDV05811.1
Outer membrane efflux protein; COG: NOG23388 non supervised orthologous group.
  
     0.407
Your Current Organism:
Bacteroides intestinalis
NCBI taxonomy Id: 471870
Other names: B. intestinalis DSM 17393, Bacteroides intestinalis 341, Bacteroides intestinalis DSM 17393, Bacteroides intestinalis JCM 13265, Bacteroides intestinalis str. DSM 17393, Bacteroides intestinalis strain DSM 17393
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